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Protein Overview: NCASE_ARATH

General Information:
Name(s) found: NCASE_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 757 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: ceramidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLPLFQF ILFLLLLLLS RTVYAYLIGV GSYDITGPAA DVNMMGYANS DQIASGIHFR  60
   61 LRARAFIVAE PQGNRVVFVN LDACMASQIV TIKVLERLKA RYGELYTEKN VAISGIHTHA 120
  121 GPGGYLQYVT YIVTSLGFVR QSFDVVVNGI EQSIVQAHES LRPGSAFVNK GDLLDAGVNR 180
  181 SPSSYLNNPA AERSKYKYDV DKEMTLVKFV DSQLGPTGSF NWFATHGTSM SRTNSLISGD 240
  241 NKGAAARFME DWFENGQKNS VSSRNIPRRV STIVSDFSRN RDRLLDIAAT YKSSRGHSVD 300
  301 KSLDVKTRVR NGSKRKFVSA FCQSNCGDVS PNTLGTFCID TGLPCDFNHS TCNGQNELCY 360
  361 GRGPGYPDEF ESTRIIGEKQ FKMAVELFNK ATEKLQGKIG YQHAYLDFSN LDVTVPKAGG 420
  421 GSETVKTCPA AMGFGFAAGT TDGPGAFDFK QGDDQGNVFW RLVRNVLRTP GPEQVQCQKP 480
  481 KPILLDTGEM KEPYDWAPSI LPIQILRIGQ LVILSVPGEF TTMAGRRLRD AIKSFLISSD 540
  541 PKEFSNNMHV VIAGLTNTYS QYIATFEEYE VQRYEGASTL YGRHTLTAYI QEFKKLATAL 600
  601 VNGLTLPRGP QPPDLLDKQI SLLSPVVVDS TPLGVKFGDV KADVPPKSTF RRGQQVNATF 660
  661 WSGCPRNDLM TEGSFAVVET LREGGKWAPV YDDDDFSLKF KWSRPAKLSS ESQATIEWRV 720
  721 PESAVAGVYR IRHYGASKSL FGSISSFSGS SSAFVVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..234] deduced N/A No confident structure predictions are available.
    2 View Details [235..296] deduced N/A No confident structure predictions are available.
    3 View Details [297..441] deduced N/A No confident structure predictions are available.
    4 View Details [442..613] deduced N/A No confident structure predictions are available.
    5 View Details [614..757] MSA 2.015952 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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