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Protein Overview: RRS1_ARATH

General Information:
Name(s) found: RRS1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|83305639|sp|Q9SH88.2|RRS1_ARATH RecName: Full=Ribosome biogenesis regulatory protein homolog [NCBI NR]
  • gi|18404610|ref|NP_565878.1| ribosome biogenesis regulatory protein (RRS1) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110740729|dbj|BAE98464.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana GN=At2g37990 PE=2 SV=2 [Swiss-Prot]
  • ribosome biogenesis regulatory protein (RRS1) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribosome biogenesis regulatory protein homolog [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ribosome biogenesis regulatory protein (RRS1) family protein | chr2:15907791-15910106 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Ribosome biogenesis regulatory protein homolog [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ribosome biogenesis regulatory protein (RRS1) family protein | chr2:15900713-15903028 FORWARD LENGTH=318 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDA]
    Biological Process: ribosome biogenesis [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTEMETEQI YQVDVGNLLA FNPNHRFPSA PSSRGELVKE ILTEGTKLVQ EIANKLFNFP  60
   61 STETNDGPIV QLPPPTTKLP REKHIPRPKP PTKWEEFALK KGIQKRKKEK VVWDEQTNQF 120
  121 KRRHGYDRVN DDNDVPIIEA KESDEPGVDP FAKRLDDKKK RVGKQEKNRL QNLKAAEKAG 180
  181 ALPSHVQLAA TSLPISGTKA QPKKIGKDEL GDVAGLAATS TASGGKFDKK LPGEKPPKKQ 240
  241 GKHHKYLPVV SGRGDVNAEK EQTNNVLSKI FSKHSHEILN VGKAINMYNV KKEKKKSGRS 300
  301 DKLKPKKDIT KKPANKAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] Pfam 118.677781 No description for PF04939.3 was found. No confident structure predictions are available.
    2 View Details [188..318] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle