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Protein Overview: gi|222423637, gi...

General Information:
Name(s) found: gi|42571053 [NCBI NR]
gi|222423678 [NCBI NR]
gi|222423637 [NCBI NR]
Description(s) found:
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  • gi|42571053|ref|NP_973600.1| katanin, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|222423678|dbj|BAH19806.1| AT2G34560 [Arabidopsis thaliana] [NCBI NR]
  • gi|222423637|dbj|BAH19787.1| AT2G34560 [Arabidopsis thaliana] [NCBI NR]
  • katanin, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Katanin [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | katanin, putative | chr2:14567345-14569774 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:14560266-14562695 FORWARD LENGTH=393 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT2G34560 protein OS=Arabidopsis thaliana GN=AT2G34560 PE=2 SV=1 [ARATH-contam.fasta]
  • AT2G34560 protein OS=Arabidopsis thaliana GN=At2g34560 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein metabolic process [ISS]
    Molecular Function: ATPase activity [ISS]
    nucleotide binding [IEA]
    ATP binding [IEA][ISS]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT  60
   61 NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR DIIRGNPNIK WESIKGLENA 120
  121 KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS 180
  181 VVSKWRGDSE KLIRVLFDLA RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI 240
  241 QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD 300
  301 EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE 360
  361 DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..393] PSI-BLAST 63.522879 No description for 2qp9X was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle