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Protein Overview: CPL3_ARATH

General Information:
Name(s) found: CPL3_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis thaliana GN=CPL3 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1241 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: NONE FOUND
    Molecular Function: phosphoprotein phosphatase activity [IEA]
    CTD phosphatase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVARSGCSR TLIRMGNDEN LMVMVDVEEG EIPDSVNTEI EVKHKSTTTT ADVGGDVDVG  60
   61 VVAGGRGGGG GGSNGNSRVW TMEELISQYP AYRPYANSGL SNLAWARAVQ NKPFNEGLVM 120
  121 DYEPRESDKI VIEDSDDEKE EGELEEGEID LVDNASDDNL VEKDTESVVL ISADKVEDDR 180
  181 ILKERDLEKK VKLIRGVLES TSLVEAQTGF EGVCSRILGA LESLRELVSD NDDFPKRDTL 240
  241 VQLSFASLQT INYVFCSMNN ISKERNKETM SRLLTLVNDH FSQFLSFNQK NEIETMNQDL 300
  301 SRSAIAVFAG TSSEENVNQM TQPSNGDSFL AKKLTSESTH RGAAYLRSRL PMLPLLDLHK 360
  361 DHDADSLPSP TRETTPSLPV NGRHTMVRPG FPVGRESQTT EGAKVYSYES DARKAVSTYQ 420
  421 QKFGLNSVFK TDDLPSPTPS GEPNDGNGDV GGEVSSSVVK SSNPGSHLIY GQDVPLPSNF 480
  481 NSRSMPVANS VSSTVPPHHL SIHAISAPTA SDQTVKPSAK SRDPRLRLAK PDAANVTIYS 540
  541 YSSGDARNLS KVELSADLVN PRKQKAADEF LIDGPAWKRQ KSDTDAPKAA GTGGWLEDTE 600
  601 SSGLLKLESK PRLIENGVTS MTSSVMPTSA VSVSQKVRTA STDTASLQSL LKDIAVNPTM 660
  661 LLNLLKMGER QKVPEKAIQK PMDPRRAAQL PGSSVQPGVS TPLSIPASNA LAANSLNSGV 720
  721 LQDSSQNAPA AESGSIRMKP RDPRRILHGS TLQRTDSSME KQTKVNDPST LGTLTMKGKA 780
  781 EDLETPPQLD PRQNISQNGT SKMKISGELL SGKTPDFSTQ FTKNLKSIAD MVVVSQQLGN 840
  841 PPASMHSVQL KTERDVKHNP SNPNAQDEDV SVSAASVTAA AGPTRSMNSW GDVEHLFEGY 900
  901 DDIQRVAIQR ERVRRLEEQN KMFASQKLSL VLDIDHTLLN SAKFNEVESR HEEILRKKEE 960
  961 QDREKPYRHL FRFLHMGMWT KLRPGIWNFL EKASKLYELH LYTMGNKLYA TEMAKLLDPK1020
 1021 GVLFNGRVIS KGDDGDPLDG DERVPKSKDL EGVMGMESSV VIIDDSVRVW PQHKMNLIAV1080
 1081 ERYLYFPCSR RQFGLLGPSL LELDRDEVPE EGTLASSLAV IEKIHQNFFS HTSLDEVDVR1140
 1141 NILASEQRKI LAGCRIVFSR IIPVGEAKPH LHPLWQTAEQ FGAVCTTQVD EHVTHVVTNS1200
 1201 LGTDKVNWAL TRGRFVVHPG WVEASAFLYQ RANENLYAIN P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] deduced N/A No confident structure predictions are available.
    2 View Details [178..348] MSA 1.244995 View MSA. No confident structure predictions are available.
    3 View Details [349..540] deduced N/A No confident structure predictions are available.
    4 View Details [541..771] MSA 1.245992 View MSA. No confident structure predictions are available.
    5 View Details [772..846] deduced N/A No confident structure predictions are available.
    6 View Details [847..1134] PSI-BLAST 50.09691 No description for 2hhlA was found.
    7 View Details [1135..1241] PSI-BLAST 7.0 The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle