| Protein: | CPL3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1241 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPL3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
527.0 | [0..1] | [1241..1] |
|
|
294.0 | [0..326] | [1240..312] |
|
|
266.0 | [0..97] | [1240..112] |
|
|
236.0 | [0..36] | [999..84] |
|
|
233.0 | [0..960] | [1240..759] |
|
|
231.0 | [0..49] | [985..446] |
|
|
231.0 | [0..618] | [1125..5] |
|
|
227.0 | [0..977] | [1240..1] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MLVARSGCSR TLIRMGNDEN LMVMVDVEEG EIPDSVNTEI EVKHKSTTTT ADVGGDVDVG 60
61 VVAGGRGGGG GGSNGNSRVW TMEELISQYP AYRPYANSGL SNLAWARAVQ NKPFNEGLVM 120
121 DYEPRESDKI VIEDSDDEKE EGELEEGEID LVDNASDDNL VEKDTESVVL ISADKVE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [178-348] |
1 11 21 31 41 51
| | | | | |
1 DDRILKERDL EKKVKLIRGV LESTSLVEAQ TGFEGVCSRI LGALESLREL VSDNDDFPKR 60
61 DTLVQLSFAS LQTINYVFCS MNNISKERNK ETMSRLLTLV NDHFSQFLSF NQKNEIETMN 120
121 QDLSRSAIAV FAGTSSEENV NQMTQPSNGD SFLAKKLTSE STHRGAAYLR S
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [349-540] |
1 11 21 31 41 51
| | | | | |
1 RLPMLPLLDL HKDHDADSLP SPTRETTPSL PVNGRHTMVR PGFPVGRESQ TTEGAKVYSY 60
61 ESDARKAVST YQQKFGLNSV FKTDDLPSPT PSGEPNDGNG DVGGEVSSSV VKSSNPGSHL 120
121 IYGQDVPLPS NFNSRSMPVA NSVSSTVPPH HLSIHAISAP TASDQTVKPS AKSRDPRLRL 180
181 AKPDAANVTI YS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [541-771] |
1 11 21 31 41 51
| | | | | |
1 YSSGDARNLS KVELSADLVN PRKQKAADEF LIDGPAWKRQ KSDTDAPKAA GTGGWLEDTE 60
61 SSGLLKLESK PRLIENGVTS MTSSVMPTSA VSVSQKVRTA STDTASLQSL LKDIAVNPTM 120
121 LLNLLKMGER QKVPEKAIQK PMDPRRAAQL PGSSVQPGVS TPLSIPASNA LAANSLNSGV 180
181 LQDSSQNAPA AESGSIRMKP RDPRRILHGS TLQRTDSSME KQTKVNDPST L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [772-846] |
1 11 21 31 41 51
| | | | | |
1 GTLTMKGKAE DLETPPQLDP RQNISQNGTS KMKISGELLS GKTPDFSTQF TKNLKSIADM 60
61 VVVSQQLGNP PASMH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [847-1134] |
1 11 21 31 41 51
| | | | | |
1 SVQLKTERDV KHNPSNPNAQ DEDVSVSAAS VTAAAGPTRS MNSWGDVEHL FEGYDDIQRV 60
61 AIQRERVRRL EEQNKMFASQ KLSLVLDIDH TLLNSAKFNE VESRHEEILR KKEEQDREKP 120
121 YRHLFRFLHM GMWTKLRPGI WNFLEKASKL YELHLYTMGN KLYATEMAKL LDPKGVLFNG 180
181 RVISKGDDGD PLDGDERVPK SKDLEGVMGM ESSVVIIDDS VRVWPQHKMN LIAVERYLYF 240
241 PCSRRQFGLL GPSLLELDRD EVPEEGTLAS SLAVIEKIHQ NFFSHTSL
|
| Detection Method: | |
| Confidence: | 50.09691 |
| Match: | 2hhlA |
| Description: | No description for 2hhlA was found. |
|
Region A: Residues: [1135-1241] |
1 11 21 31 41 51
| | | | | |
1 DEVDVRNILA SEQRKILAGC RIVFSRIIPV GEAKPHLHPL WQTAEQFGAV CTTQVDEHVT 60
61 HVVTNSLGTD KVNWALTRGR FVVHPGWVEA SAFLYQRANE NLYAINP
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1wf6A |
| Description: | The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product |
Matching Structure (courtesy of the PDB): |
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