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Protein Overview: gi|30684625

General Information:
Name(s) found: gi|30684625 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30684625|ref|NP_850148.1| lipase class 3 family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: lipid metabolic process [IEA]
    Molecular Function: triglyceride lipase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIPSHNNL LTINHKNSIT GSSSLNTNFS EINFPAKFRV ATRALSRTDE SSLSAVISRL  60
   61 ERERRERQGL LIEEAEGAGE LWMTAEDIRR RDKKTEEERR LRDTWRKIQG EDDWAGLMDP 120
  121 MDPILRSELI RYGEMAQACY DAFDFDPASK YCGTSRFTRL EFFDSLGMID SGYEVARYLY 180
  181 ATSNINLPNF FSKSRWSKVW SKNANWMGYV AVSDDETSRN RLGRRDIAIA WRGTVTKLEW 240
  241 IADLKDYLKP VTENKIRCPD PAVKVESGFL DLYTDKDTTC KFARFSAREQ ILTEVKRLVE 300
  301 EHGDDDDSDL SITVTGHSLG GALAILSAYD IAEMRLNRSK KGKVIPVTVL TYGGPRVGNV 360
  361 RFRERMEELG VKVMRVVNVH DVVPKSPGLF LNESRPHALM KIAEGLPWCY SHVGEELALD 420
  421 HQNSPFLKPS VDVSTAHNLE AMLHLLDGYV SFLFYFSLFI YSCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] MSA 3.128996 View MSA. No confident structure predictions are available.
    2 View Details [148..464] PSI-BLAST 46.69897 CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle