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Protein Overview: MED8_ARATH

General Information:
Name(s) found: MED8_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana GN=MED8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 524 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of flower development [IMP]
    defense response to fungus [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METQPQQPPP PPVAEKLNPK LEKELNLESL KTRAVSLAKA IARILEDFDA YGRTNTTPKW  60
   61 QDILGQYSMV NLELFNIVEE VKRVSNAFVV LPKNVNAMNA AILPVMLSSK LLPEMETDDN 120
  121 AKREQLLQGV QSLPIPMQIE RLKARMDMIA AACENAERVL ADTRKAYGFG TRQGPSMLPT 180
  181 MDKGQAAKIQ EQEKMLRDAV NDGKGTQLPP DQRQITTALP PHLADVLIIN DAGKIALPGQ 240
  241 SNNINNQGMM QVSGTQFVGR SAASPSGPNF DNTTSPLPYS NSPRATGMVN VPSPQHQIQQ 300
  301 QQFQQQQQRS KLMQLPQHQQ QQLLAQQQQQ LRQSSMQGLG QSQIPALHDM HGQAQQKFQT 360
  361 SHGQHQMPYS QPMGAHQQFQ ARQLSGGHIQ HSMSQGQLNP AMNRHLNQFS GGANSALFTS 420
  421 AQGSPSSQMI PNMSSMQSQT LVPRMQQFGV SGTNPQRSHS SQMLGDQMFN TSGMMQTQQT 480
  481 QIQQSQQQQQ QQQQGGYGNM QTNQQSLQPN NMMQNAQQRH QNPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] MSA 1.003965 View MSA. No confident structure predictions are available.
    2 View Details [168..315] deduced N/A No confident structure predictions are available.
    3 View Details [316..524] PSI-BLAST 3.39794 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle