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Protein Overview: gi|63147406, gi|...

General Information:
Name(s) found: gi|63147406 [NCBI NR]
gi|42570835 [NCBI NR]
gi|42569190 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|63147406|gb|AAY34176.1| At2g20650 [Arabidopsis thaliana] [NCBI NR]
  • gi|42570835|ref|NP_973491.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42569190|ref|NP_179657.2| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 559 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLGNFGVW GFGFFSLSIW FAVLQQANGL RPIRETARSW GDEWLFGKKE KGGAGPFSAW  60
   61 NITGTYRGTW KFLDTVNSSS KFPDFRKESG NSVIELVTSP TKITGVHYVQ GAVVFHDVFD 120
  121 NEHNVGGAQI KVEGVYIWPF RQLRLVANSG KKSDSGLEDD YLLSNPYHLL GIFSSQVFQE 180
  181 SPRDRILKQK TSPIYEMEKH CNIEIAAQIS QSTSSENNGD KDRYQIEGLM ESPAVDDEVD 240
  241 CFSPLSLNAT SINVEVYYNK AVNYTLMVTF VSFLQVLLLI RQMEHSNTQS GAAKVSIVMI 300
  301 GQQAIMDSYL CLLHLTAGIL VESLFNAFAT AAFFKFVVFS IFEMRYLLSI WKATRPSTSG 360
  361 EGWETMRREL SFLYSRFYGI LLGGILLMYE FHNYMRPILL LMYSFWIPQI VANVVRDSRK 420
  421 PLHPYYILGM TVTRLAIPLY VFGCPKNFMR VEPSKAWCVS LCAFMGFQAG VLLLQHYFGS 480
  481 RCFVPRKLLP EKYSYYRRLD HNVNRSRDCV ICMTTIDLRH RINDCMVTPC EHIFHSGCLQ 540
  541 RWMDIKMECP TCRRPLPPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] deduced N/A No confident structure predictions are available.
    2 View Details [243..418] MSA 1.195991 View MSA. No confident structure predictions are available.
    3 View Details [419..497] deduced N/A No confident structure predictions are available.
    4 View Details [498..559] PSI-BLAST 11.0 Solution structure of RING finger in RING finger protein 38


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle