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Protein Overview: gi|780365

General Information:
Name(s) found: gi|780365 [NCBI NR]
Description(s) found:
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  • gi|780365|gb|AAB05843.1| ORF [NCBI NR]
  • ORF [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Rattus norvegicus (Fragment) [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Rattus norvegicus [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta]
  • Rattus norvegicus (clone REM3) ORF (Fragment) OS=Rattus norvegicus GN=Supt5h [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 134 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    nucleoplasm [UNKNOWN]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    positive regulation of RNA elongation from RNA polymerase II promoter [IEA]
    RNA elongation [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    regulation of transcription from RNA polymerase II promoter [IEA]
    RNA elongation from RNA polymerase II promoter [UNKNOWN]
    Molecular Function: transcription elongation regulator activity [IEA]
    protein binding [UNKNOWN]
    protein heterodimerization activity [UNKNOWN]
    negative transcription elongation factor activity [UNKNOWN]
    positive transcription elongation factor activity [UNKNOWN]
    enzyme binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGVVKDATES TARVELHSTC QTISVDRQRL TTVDSQRPGG MTSTYGRTPM YGSQTPMYGS  60
   61 GSRTPMYGSQ TPLQDGSRTP HYGSQTPLHD GSRTPAQSGG WDPNNPNTPS RAEEEYEYAF 120
  121 DDEPTPSPQA YGGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle