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Protein Overview: RPL26B

General Information:
Name(s) found: RPL26B / YGR034W [SGD]
Description(s) found:
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  • gi|1710575|sp|P53221.2|RL26B_YEAST RecName: Full=60S ribosomal protein L26-B; AltName: Full=L33; AltName: Full=YL33 [NCBI NR]
  • gi|116006491|ref|NP_011548.2| Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA; Rpl26bp [Saccharomyces cerevisiae] [NCBI NR]
  • 60S ribosomal protein L26-B OS=Saccharomyces cerevisiae GN=RPL26B PE=1 SV=2 [Swiss-Prot]
  • Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA [SGD]
  • 60S ribosomal protein L26-B (YL33) [nrdb_11152004_Chlamydomonas]
  • RPL26B SGDID:S000003266, Chr VII from 555816-555834,556312-556676, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA" [yeast-contam.fasta]
  • Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA; Rpl26bp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • 60S ribosomal protein L26-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL26B PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • RPL26B SGDID:S000003266, Chr VII from 555812-555830,556308-556672, Genome Release 64-1-1, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA" [yeast-030211-contam.fasta]
  • RPL26B SGDID:S000003266, Chr VII from 555812-555830,556308-556672, Genome Release 64-2-1, Verified ORF, "Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication" [20141208_orf_trans.fasta]
  • YGR034W SGDID:S000003266, Chr VII from 555812-555830,556308-556672, Genome Release 64-1-1, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
  • asmbl_7296|g.5265 ORF asmbl_7296|g.5265 asmbl_7296|m.5265 type:complete len:128 (+) asmbl_7296:46-429(+) [DBVPG6044_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • asmbl_7497|g.5429 ORF asmbl_7497|g.5429 asmbl_7497|m.5429 type:complete len:128 (+) asmbl_7497:704-1087(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • ID=asmbl_7276|g.4442 ORF ID=asmbl_7276|g.4442 ID=asmbl_7276|m.4442 type:complete len:128 (+) ID=asmbl_7276:46-429(+) [DBVPG6044_quiverGenomes_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
  • ID=asmbl_7729|g.4696 ORF ID=asmbl_7729|g.4696 ID=asmbl_7729|m.4696 type:complete len:128 (+) ID=asmbl_7729:704-1087(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 127 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [IEA]
    cytoplasm [IEA]
    cytosolic large ribosomal subunit [IDA]
    large ribosomal subunit [IEA]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: translation [IDA]
    Molecular Function: RNA binding [IDALink to PubMed article]
    structural constituent of ribosome [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQSLDVSS DRRKARKAYF TAPSSERRVL LSAPLSKELR AQYGIKALPI RRDDEVLVVR  60
   61 GSKKGQEGKI SSVYRLKFAV QVDKVTKEKV NGASVPINLH PSKLVITKLH LDKDRKALIQ 120
  121 RKGGKLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data RPL26B Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 29.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle