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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149058490, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFALDKHG TLWLHNLTVR TNYTCAAEVL YNNVILLKQD RRVQTDFGTP EMLPHVQCKN  60
   61 STNSTTLVSW AEPASKHHGY ILCYKKTPSE KCENLANDVN SFEVKNLRPY TEYTVSLFAY 120
  121 VIGRVQRNGP AKDCNFRTKA ARPGKVNGMK TSRASDNSIN VTCNSPYEIN GPEARYILEV 180
  181 KSGGSLVKTF NQSTCKFVVD NLYYSTDYEF LVYFYNGEYL GDPEIKPQST SYNSKALIIF 240
  241 LVFLIIVTSI ALLVVLYKIY DLRKKRSSNL DEQQELVERD EEKQLINVDP IHSDLLLETY 300
  301 KRKIADEGRL FLAEFQSIPR VFSKFPIKDA RKSQNQNKNR YVDILPYDYN RVELSEINGD 360
  361 AGSTYINASY IDGFKEPRKY IAAQGPRDET VDDFWKMIWE QKATVIVMVT RCEEGNRNKC 420
  421 AEYWPCMEEG TRTFRDVVVT INDHKRCPDY IIQKLSIAHK KEKATGREVT HIQFTSWPDH 480
  481 GVPEDPHLLL KLRRRVNAFS NFFSGPIVVH CSAGVGRTGT YIGIDAMLES LEAEGKVDVY 540
  541 GYVVNLRRQR CLMVQVEAQY ILIHQALVEY NQFGETEVNL SELHSCLQNL KKRDPPSDPS 600
  601 PLEAEYQRLP SYRSWRTQHI GNQEENKKKN RSSNVVPYDF NRVPLKHELE MSKESEAESD 660
  661 ESSDEDSDSE ETSKYINASF VMSYWKPEMM IAAQGPLKET IGDFWQMIFQ RKVKVIVMLT 720
  721 ELMSGDQEVC AQYWGEGKQT YGDMEVMLKD TNKSSAYILR AFELRHSKRK EPRTVYQYQC 780
  781 TTWKGEELPA EPKDLVTLIQ NIKQKLPKSG SEGMKYHKHA SILVHCRDGS QQTGLFCALF 840
  841 NLLESAETED VVDVFQVVKS LRKARPGMVG SFEQYQFLYD IMASIYPTQN GQVKKANSQD 900
  901 KIEFHNEVDG AKQDANCVQP ADPLNKAQED SKEVGASEPA SGSEEPEHSA NGPMSPALTP 960
  961 SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle