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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45551030, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDNAIKPHP EANGAPINAG DRPITTVINI EPEPETESPI GIFTSQPESQ QQQPEQLQSE  60
   61 SESDRMANFD DTLQRARLAF SSGKTRNVSF RRKQLENLLR CYEEHENEII SALEADLRRP 120
  121 KQESLIVETE FMKNDIRHIL FQLDEWVQSE KPPKSFVNMM DDVQIYNDPF GVVLVIGAWN 180
  181 YPLQLLLVPV ASAIAAGNCV VIKPSEIAAN CAKFIADVIP KYLDNDCYPV VCGGPSETAE 240
  241 LLNQRFDYIF YTGSTRVGKI IHAAANKYLT PTTLELGGKS PCYIDKSVDM RTAVKRILWG 300
  301 KLINCGQTCI APDYILCSKE VQEKFIVEAK DVLKEWYGEN IQSSPDLSRV INANNFQRLL 360
  361 GLMKSGRVAV GGNYDASERF IEPTILVDVK ETDPIMEEEI FGPILPIFNV ESAYDAIKFI 420
  421 NARESPLVLY IFTPTAEVQN LFINGTQSGG LCVNDTIMHY AGKNPTSVNP KVAPIEMLMA 480
  481 VDYDNKEKPL VIYVFSNSNK LVKEFRRSTT SGGFSSNETI MHCGVDVLPF GGVGMSGMGR 540
  541 YHGKYGFETF THKKSCLGKD LSPLGEKLSS ARYPPYSDRK GSLLSFLLRK RRPLPNLHLS 600
  601 HVLAIGLGVG LTVLTNYYLQ GKLLSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle