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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ndg-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTFGSKLLA CLLLSSVILV SGQFEHYLDS LRASELYEFE DGSLGSIHLL PKGDSETIVL  60
   61 QLEQPIHFYG EQYEQLYINT NGILTFNSEF PEYLNQPFPL EYASIAAFYS NVDTSFSDEG 120
  121 TSISLFESKE QSILDRASSL VRYAFSSQSE FEARQVIVAT WRNVGYFDSK TDRLNTFQVA 180
  181 LIANEQSTFV QFIYPDGGLN WLQGETAGLG LPDIRAQAGF VAEDGRFYTL NGSGSENARF 240
  241 LSESTNLGVP GVWLFEVAPI ENEQNVRSPD NAESLTESPA LALSCQAHAH QCHEKAECHD 300
  301 KAEGYCCVCG SGFYGNGKSC LANDQPIRVT GTLTGELNKQ PVSEEAKLQS YVVTSEGRTY 360
  361 TTINPLTPEL GAQLRLVLPL LTTVPWLFAK SVGGVANGYQ LTGGVYTHVS RLQFDSGENL 420
  421 HVNQTFEGLN YWDQLSVKIE IYGEVPAVAA DAVLILPDYV EEYTFERPGE LKSVQVLNIN 480
  481 ITEEQRVLGL QVEQRILYRS CLRDDEADPS ATKVLQKISK VALDYVERDQ ALRIGAMSKV 540
  541 GVTPESNACN DGTADCVENS VCVPYEDTYR CDCYHGFAAQ LDERGVEVCL DIDECATGSH 600
  601 VCDENAVCDN TEGGFNCYCT EGFEGNGYRC LSNSTADNIE YPPAVEGQAE PTSEPSPNPS 660
  661 PYPDQGQDQE REREDDQYPQ PNPYPYPEEQ IPQHPDECYR CSKDADCYQG RCTCHEGFDG 720
  721 DGYTCTNICG HGEVWENGRC EPLLLERHDV DPLCDALGEC RCPYGYELSE DSQRCTYVQE 780
  781 FDGERNADLI PCDVDENCHI NATCNWYGQE LRHICTCQPG FRGDGYNCDP ISDDSCAIVS 840
  841 DYSPIYDIPM TASLKPLQRP DICDVHADCV YEEHLGKSEC QCQAGYTGNG FNCQLAAECQ 900
  901 SAEHCGENAF CDDGVCRCQA DFERDVSDRC VPAGRCGSVF CGSNAICKWD SAEGVQYCDC 960
  961 LDGYQGDALT GCTSKPLSCH VLNNCGIHAT CEPTEDPANY ECQCIAGFKG DGYVCIEEQN1020
 1021 CLNNPTLCDM NAQCRSTNSG LVCVCNQGFF GNGSLCQERQ HQDSDFLIVS QGVMIARVPL1080
 1081 NGRNVRPISV AQMAIGLDKD CVEGRVYWGD ISTKKIVSTK YDGTDLRPFI TTDIESPEGI1140
 1141 AIDVISRRLY WADSAKDTIE VASLDDPSLR AVIINKQLVN PRGIAVDPYR EKLFWSDWDR1200
 1201 ESPKIEMSNL DGTGRELLLG KDDVTLPNSL VVLENSGEVC YADAGTKKVE CIEPQNRQIR1260
 1261 TISNELSYPF GITFTHDQFY WTDWTTKKVE IVDSLGARQT PIQPPFFGSH KMYGMTVVEQ1320
 1321 HCPQYQSPCQ ISNGGCTDSR LCLVNRQAPS GKSCKCTSAS TGCTVLAPGY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle