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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wfs1-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATWTQNEPT GVTKRRRWNL EDRASLNKLK HHIAEEGCPQ MQYDLAKELL DNSIVEPNLA  60
   61 KGNQSQKAVN WLVSAAHNGH EDAVKLLRQC YNDGSGITAE NTDEVRRCLA MTPGERAARK 120
  121 AARELFACLS NGNEHITPKQ LERKMRRIYN LQRKRRRRDD DRSSSSSEGE QEPECEPLED 180
  181 VPTIDLANVE RRRLITEAHL VSAASNYSAG QMPSVNDALT LSVPDPRSLD HVPCFYRMIF 240
  241 HPLIFFTLFY HRLLNLIVSI PNVIPLSVRC SVLVAISWWS SRHMLPLVSY YLSLGIMIWA 300
  301 TCKMLKTKQQ FVDFRIWSGL FLSYGDQNIE ADIAEHRFLR NNMKPYLYFF CAFICNLIVY 360
  361 PLVTDAWLPH SELTIISGAL TFITMCVSMY ASSHQLPDWL VIVSFAVNVL AKYPYEMDEV 420
  421 VSTRWRFLDL RVPTFSSFVI GNGIEFCLNC RTALYLFIPV LLIMMAKRSR WHGVYTFLIP 480
  481 HCVTLSWLQV CIATSQSSTV FGVMRAALGL AGIVLFLPLF GIVALLVPVF VAIDSLGLAS 540
  541 EQLRWGSTAL ACGLVVVLSC ILALNRATQK YITMLQLITA ITTACLLVLP YMTSSFKDTP 600
  601 RFNAMPRAGL HSLSETNTLP WDRFHALCAQ PVHEQPNKIK AQLRCSLLNG MPVIWEGSVT 660
  661 KVEISRVSNF LEDTIANYLP VWLGRMLRCL HGENISQHFK CDPKLDAQCE EWRSVFKTFN 720
  721 AQSGSCTLQR WNRYEYELLV KVGTKRSGRL LGRSTTTDVI LRAHHDFGNF TRLLSEGDVV 780
  781 LFYGILHNSR LLADNVQVKL KTIECVECRS RDLGTASIER VVAASPMDAR LQDLMRGIKY 840
  841 LLNALLNPLI TFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle