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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Pvr-PE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.04
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLPRLILL PLLLILRISW SDAVPLQQFS PDPDDSIENC GGENGAPLMT PCKSAIILDA  60
   61 QTSTTLKCED DEPMSWWTSQ SQYVHVKSFD NTEDPARPFG TSLHLIEVTA DYVAAYYCVK 120
  121 TSKFSQIAKE EQSDEAMIEL VNQGYASSIY VYVNDPDTKL VDSHNVVTAR QYTDVVIPCK 180
  181 PAMPDTEVLL ETSNGEMHSS KSVGRYDPQR GFTIEIRSIV DGGDYYCRPN PPFPHNEEEM 240
  241 TSIEVRFIED GKPLPKPVIR SSVEHHVFTD TNFTLDCEQS AYVESVYGME WFTPSRDENR 300
  301 IFASQSRTDP KTRNSTHQTG RSTLTVLNAQ PSDTGLYKCV TTDNSNQNVQ RATYRIKVLK 360
  361 QNESYLNVGE PSGHYNVQEY ANRTIQMTAN FEGFPTPSFS WFKPDGTEVR QSENNFKILS 420
  421 TELSTMLQVL NAQLQDSGTY VLRGSNSFGV VQREYNVSVM DAPALKMSDA YVQVGSVARL 480
  481 ECTVRSYPPA IVTFFFRPCS LEPQWPTCSV LNQNFSLPSE QEKYQFQTRP RPGKLSVERI 540
  541 YEVSFLPTEP GILTCIAQNI IDGKERRTLT KAHVLLGNIS ENMTIYGFDK DHKIAKEDNV 600
  601 NFTCEALAYH FDGNLKWFIN GEDLKESDSV HIETSHTKYS YKSTVHITTI SDRDRGTYEC 660
  661 RAYHNDKDAV YSSREIDLYV HDPSAPQWTN GGQEGHSKIK RKLSQTLELE CASTAVPVAI 720
  721 VRWFKDDKEV TESKLRHIIE KESKLLITHL YPGDEGVYKC VVENRLDRIE RSFTVVISDL 780
  781 PGISMAWVWF GVILFLILIG LCVFLAVRYQ KEHKRHLALK AAGLANFEEG AVGHINPDLT 840
  841 LDEQAELLPY NREFEFPREN LKLGKQLGAG AFGVVLKGEA KGIRREEPTT TVAVKMVKAT 900
  901 ADNEVVRALV SELKIMVHLG QHLNVVNLLG AVTKNIAKRE LMVIVEYCRF GNIQNFLLRN 960
  961 RKCFINQINP DTDHIDPSIM TQRMSDNYEL HRDTNGGGLK YANVGFPIHS YINEPHNNNT1020
 1021 QPPTHRRNSD NDPRSGTRAG RTGSGTATYS YDRQMDTCAT VMTTVPEDDQ IMSNNSVQPA1080
 1081 WRSNYKTDST EAMTVTTVDL ISWAFQVARG MDYLSSKKVL HGDLAARNIL LCEDNVVKIC1140
 1141 DFGLARSMYR GDNYKKSENG KLPIKWLALE SLSDHVFSTY SDVWSYGIVL WEMFSLAKVP1200
 1201 YPGIDPNQEL FNKLNDGYRM EKPKFANQEL YEIMLECWRK NPESRPLFAE LEKRFANMLG1260
 1261 EDVASHYLDL NNPYMQSNIE YMKKQSTDYL ALMGSPDELA PAAPRYVNGH IVPDIRIEEL1320
 1321 PDDYMEMSRD SDPDACTAIF SPTRLEGESS DFPDFSSETT FNFPGARQSP TLSNNLNSGS1380
 1381 SKPLRKKNGM PTVDVADQAP EEIPMLHRSS TGSDGSPEQG RRFNQALKQQ YVTPTPSPRH1440
 1441 HVETKLNGEP SENYVNMKPP RKNIPGKTTT GGGGAAAGAS TEAFSNPSYQ PLSTVNEKEQ1500
 1501 RRY

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