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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45447058, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRVPCIKFL EPAVSNCANS QMIVQSVLME LVFHSCAAGP HEKRLLHALL DNYNSLERPV  60
   61 VNESDPLQLS FGLTLMQIID VDEKNQLLIT NIWLKLEWND MNLRWNSSEF GGVRDLRIPP 120
  121 HRLWKPDVLM YNSADEGFDG TYATNVVVRN NGSCLYVPPG IFKSTCKIDI TWFPFDDQRC 180
  181 EMKFGSWTYD GFQLDLQLQD EAGGDISSFI TNGEWDLLGV PGKRNEIYYN CCPEPYIDIT 240
  241 FAILIRRKTL YYFFNLIVPC VLIASMALLG FTLPPDSGEK LSLGVTILLS LTVFLNMVAE 300
  301 TMPATSDAVP LLGTYFNCIM FMVASSVVST ILILNYHHRN PDTHEMSEWI RVIFLYWLPC 360
  361 ILRMQRPGQV GYECPPPPSS SSSSASGEKK QQIQNVELKE RSSKSLLANV LDIDDDFRCN 420
  421 HRCASATLPH QPTYYRTMYR QGDDGSVGPV GPAGPVVDGR LHEAISHTCL TSSAEYELAL 480
  481 ILKELRWITE QLKKEDETSD ITRDWKFAAM VVDRLCLIIF TLFTIIATLA VLFSAPHFIF 540
  541 P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle