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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nvy-PA
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMALDGKAII KEEITDKDAY DAAAAAAAAV AAGAALAVAS AAAVQVPPAS SSSAGSASSA  60
   61 AAAATNNTTS AAATAAAISR RLKASSSGGD KSSTSSSSSK DSSHTSSSRS ERDRERERER 120
  121 ERERDRLCRT PPDSPPDSSR SLAPRSPHSP LQLHQHPQRN ASVSPVVNGS SSGGGGVGSS 180
  181 GTSPTPTPGS QHAASLAAAA AAAAAAHVEQ ARLVSKMRKF LGALVQFSQE LGQPEVCERV 240
  241 RALVLSLCSG SISVEEFRLA LQEAINLPLR PYVVPLLKNS IALVQREILA LARATNQSAL 300
  301 QYVTNNEQAV MEFAPHGVAS AEFGDIFIQL EAPTSNGSSA VFKRRSSDSM MEHGGHNGLQ 360
  361 EWNEYMASGG AGYPPPPSKR LTLHPAHSVV AYGEYGVSSA EGLPSAAAFM QRDERDLRMS 420
  421 EAQARHAAPP QRAGNPQPNP NAAAPGAPGA GGEEEWKNIH TMLNCISAMV DKTKRAITIL 480
  481 QQRGIEPQHP NSGQEVTPAA MAELRRQTEE KVAEFKRNAE DAVTQVKRQA VIEIQRAVVA 540
  541 AETRAAEIMT QERLRMEKFF MEMSRHSSGE RDLDNKSPSM ASAQNGSNLQ QQCWNCGRKA 600
  601 TETCSGCNMA RYCSASCQYR DWDSHHQVCG NTRASELSAK HLHSASNLSL RNAMATRSPP 660
  661 TPNSAAHLQA AAAAAAAAAG AREAVSAPVG GPGAGIAVGT GAGSGGQSGG GGGGGGGGGG 720
  721 GAAAAAVAAA TPGALVANGL GSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle