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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: yu-PC
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLPCRCCCC SGKVTIFQYS AKMVSGRPLL YLSLPGVAFI LGVFWFRRRY KNCLDKPDDE  60
   61 DSSAINDSSI EPTVQARKAN GVLQNGKLPQ QSASKSMNIN GTLVNGSGSG SGSSSDEKDS 120
  121 PTTMLYGKSA PIKIQSNGRT SNGKHQQQID SEILKSKIQD AEHKTLCSID EDFENLSSPR 180
  181 DLPDSVNTRV SFYNRKATQK TVEPVVIKAT RTPKISPENS FLDTNYTNKE CEQNNNCEPK 240
  241 EEPSKKEADQ EELEQDQEQT VLKEEVVDSN GNQKRNVDAA SPSLSICSVQ SGDSGKGSSL 300
  301 PRSEATRVKT TYEFLFPISL IGHLYGRKRA FINQIKAKTL ASVSVGKNPY SGKVRICTIE 360
  361 GTESEIDAAL AMIRQRLPAK RYPNFTMQRI HFALPQTIVP LSTESLYNLQ LKLIEGINND 420
  421 VVVSAVLSGS HIFIQHPLHP SHPSLPLLQK QLYDSYSTME APLLPSLELS AVCVIPINDV 480
  481 WYRVQIVDTD PEDEERCVIK FLDFGGYMNV GFNTLRQIRT DFMNVPFQST ECILSNIEPI 540
  541 GGTWSIEAAE ILNKLTKGIV LQAQVAGYNS HNLPEIFLFA SLGPNNVIFI NKELVGRKLA 600
  601 KWVEMSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle