YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74876832, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQKLNDTT NSGYVSSEET DSLLVSSSNP SKGGGRTALL RQVKSNSTNG PTTGASTSSS  60
   61 GSVSGGGGGS GSGGGSASGS AAGASKPTLM RQDRTSTYLT SPQQSQHARM GSEESMRGGA 120
  121 SGAAGHDEDV EQGLVRSSIV PDIEVHEEDQ EQHSQQLNAT TMATMTNNQQ QQQPTISIMN 180
  181 LSLKPGDSHS HSSSPGSHPN LGTSSYQNLA SSIPPSVPSR CRACRNCSRR ASTTPTTLID 240
  241 RSASRDSVKS AFQQGNLSGS MAICISNSAL PQQQQLQQQY HLQQQQQQHY QLQQHHLHQQ 300
  301 QLQQSQQQVP PVLITSSPTN GSRIIRQSSQ PESSSTAICC GPHSACVGHA HSHSHTVPNV 360
  361 SLKQLRESSG DGIAGIAADS LRINGGMRPF KQLRKPASTL SIPGSMKTPS IANREQISSG 420
  421 CNEEAAEALV GIHSDYPRYM EERALTGGNT SRKPSTNSAK HKPNVGYRLG KRKALFEKRK 480
  481 RISDYALVMG MFGIIVMVIE NELSSAGVYT KASFYSTALK TLISVSTVIL LGLIVAYHAL 540
  541 EVQLFMIDNC ADDWRIAMTW QRISQIGLEL FICAIHPIPG EYYFQWTTKL ANKNKTIGTE 600
  601 MVPYDVALSL PMFLRLYLIC RVMLLHSKLF TDASSRSIGA LNRINFNTRF VLKTLMTICP 660
  661 GTVLLVFMVS LWIIASWTLR QCERFHDEEH ANLLNSMWLT AITFLCVGYG DIVPNTYCGR 720
  721 GITLTCGMVG AGCTALLVAV VSRKLELTRA EKHVHNFMMD TQLTKRLKNA AANVLRETWL 780
  781 IYKHTRLVKR VNPGRVRTHQ RKFLLAIYAL RKVKMDQRKL MDNANTITDM AKTQNTVYEI 840
  841 ISDMSSRQDA IEERLTNLED KMQSIQEHME SLPDLLSRCL TQHQERIEQR RNFLHPDTAA 900
  901 VAPIQAPTPQ SMFNAAPMLF PHSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle