YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54673670, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRGRRRSS HFLGPPAGAA GCTQRRSREL AAAAMSHQTG IQASEDVKEI FARARNGKYR  60
   61 LLKISIENEQ LVIGSYSQPS DSWDKDYDSF VLPLLEDKQP CYILFRLDSQ NAQGYEWIFI 120
  121 AWSPDHSHVR QKMLYAATRA TLKKEFGGGH IKDEVFGTVK EDVSLHGYKK YLLSQSSPAP 180
  181 LTAAEEELRQ IKINEVQTDV GVDTKHQTLQ GVAFPISREA FQALEKLNNR QLNYVQLEID 240
  241 IKNEIIILAN TTNTELKDLP KRIPKDSARY HFFLYKHSHE GDYLESIVFI YSMPGYTCSI 300
  301 RERMLYSSCK SRLLEIVERQ LQMDVIRKIE IDNGDELTAD FLYEEVHPKQ HAHKQSFAKP 360
  361 KGPAGKRGIR RLIRGPAETE ATTD

Type	Start	End	Confidence
Signal Peptide	1	22	0.87
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	384	0.99