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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cpo-PE
Protein type: Globular with Signal Peptide
Type Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKIANYQDL LGSHHQLLIA ATAAAAAAAA AEPQLQLQHL LPAAPTTPAV ISNPINSIGP  60
   61 INQISSSSHP SNNNQQAVFE KAITISSIAI KRRPTLPQTP ASAPQVLSPS PKRQCAAAVS 120
  121 VLPVTVPVPV PVSVPLPVSV PVPVSVKGHP ISHTHQIAHT HQISHSHPIS HPHHHQLSFA 180
  181 HPTQFAAAVA AHHQQQQQQQ AQQQQQAVQQ QQQQAVQQQQ VAYAVAASPQ LQQQQQQQQH 240
  241 RLAQFNQAAA AALLNQHLQQ QHQAQQQQHQ AQQQSLAHYG GYQLHRYAPQ QQQQHILLSS 300
  301 GSSSSKHNSN NNSNTSAGAA SAAVPIATSV AAVPTTGGSL PDSPAHESHS HESNSATASA 360
  361 PTTPSPAGSV TSAAPTATAT AAAAGSAAAT AAATGTPATS AVSDSNNNLN SSSSSNSNSN 420
  421 AIMENQMALA PLGLSQSMDS VNTASNEEEV RTLFVSGLPM DAKPRELYLL FRAYEGYEGS 480
  481 LLKVTSKNGK TASPVGFVTF HTRAGAEAAK QDLQGVRFDP DMPQTIRLEF AKSNTKVSKP 540
  541 KPQPNTATTA SHPALMHPLT GHLGGPFFPG GPELWHHPLA YSAAAAAELP GAAALQHATL 600
  601 VHPALHPQVP TQMTMPPHHQ TTAIHPGAAM AHMAAAAAAA AAGGGGGAAT AAAAPQSAAA 660
  661 TAAAAAAASH HHYLSSPALA SPAGSTNNAS HPGNPQIAAN APCSTLFVAN LGQFVSEHEL 720
  721 KEVFSSHGNS NWLKLLHQ

YRC Informatics Platform - Version 3.0
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