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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: exp-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASILILAT CHQVLADFNS YVVPQPHAQR DHRQDISQHY DYLMEENDEP LGRGAAPSKY  60
   61 RSSHGQAQHR PEMTESENFA QPNTESVFSS GGVDSYGETR DFLQFLRRIQ YDHRQVPENE 120
  121 KGEATYVEVS VVVSNIRAVS EVTMDYALEL FYRESWRDPR LQYDRKLFKN KTELALHESY 180
  181 TNFLWFPDTF VPNAIASKNP QRNSISHRSL LRLDETGKLL YSRRISLVCE CTMDLTLFPF 240
  241 DKQLCKLGIE SYGYTADHVV YKWSKGARTA LELKKIRLPD FTIQEAYVTS QMESYATGNY 300
  301 SRLYVCFVFS RSSGFCFLQL IIPSTAVVIT SWVSLWMETE TEFQDMISII LAITFLIFSY 360
  361 NEMMPRVSYI KAMDIYLGVC FMIVFLSLIK LALVKYMRQK IMLTSDSGNS LREMSQMSTR 420
  421 QRLRARKTSN MNFRNNGGGS IPINEEHQQM LTVPNGEDKM ANGDDKEANN NGKSHLSDML 480
  481 EIRITQRTMH RFHWISQMLF FFGFVIFCLF YFLIYPNLHI VSVDPACDKN LAEWFADIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle