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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: crm-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLVVCVFLL LFSFVNFLRT EQSERMHDDC LKAICPLVFH KGCPSDSQLI TVSPAPGNCC  60
   61 PPPGSCHCDQ KKCVPSVPTC TKEERLVMVE KGSDIPGKCC AYYECHKKEK KCENVHCPPM 120
  121 FQDEEECPPD SIRPPESISK ESCCPIRQSC KCRGSICRPA QCPDGKVVNV TKKGTGFPGR 180
  181 CCDKWECVDA ELSKAKCNHS GIERQPLETW HVSDCESCQC IRGVSVCNKM TCPKVNQECT 240
  241 WIGIPTGECC PVCLGCQTDN QTKLERGATW QKDDCTSCTC SELGAHMCEK YMCKTDCENP 300
  301 RKVEGQCCPV CDEPTIIRPP ATCPSLELCS LRCANGLRRD NIGCYVCECL PDEVPTNPRC 360
  361 RELNDENCEK QCAHGYLKDE DGCTVCKCSK CPPLHQCHKH CLYGFETNSA GCSLCKCRAS 420
  421 SKLDKKQGTT KSTKLGAGSA QQTEYHSEKC ISFSNDGHQI VRDGGEWWSD GCRHCFCENK 480
  481 QEFCSLISCP TKPSDCADEK WVQKEDECCP SCIDQKKKPK SSNSLAAQKH EHTVCQSPGT 540
  541 GRLFTDGETW QLAPCVSCTC RVGHVLCRTT ECPPIACPNP EYQNEEDCCP TCPEQKVENT 600
  601 KNEKGDTIVC TDDAGTAHIV AAQVQRSRPN SIGGSINSKT FSVKNNWIHA KTRGLEGHER 660
  661 RKYGGIVEDI N

YRC Informatics Platform - Version 3.0
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