YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ESM1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNLNLVSV LGVLLVLTIF HNPIIVYAGE GVPNVALFTF GDSYYDAGNK VFLSQRKDLP  60
   61 QTYWPYGKSR DYPNGKFSDG HIVPDFIADF ISIPNGVLPP VLKPGVDISR GVSFAVADAS 120
  121 ILGAPVESMT LNQQVVKFKN MKSNWNDSYI EKSLFMIYIG TEDYLNFTKA NPNADASAQQ 180
  181 AFVTNVINRL KNDIKLLYSL GASKFVVQLL APLGCLPIVR QEYKTGNECY ELLNDLAKQH 240
  241 NGKIGPMLNE FAKISTSPYG FQFTVFDFYN AVLRRIATGR SLNYRFFVTN TSCCGVGTHN 300
  301 AYGCGKGNVH SKLCEYQRSY FFFDGRHNTE KAQEEMAHLL YGADPDVVQP MTVRELIVYP 360
  361 TGETMREYWE PNNLAIRRRP SRDFYLGLAA YY

Type	Start	End	Confidence
Signal Peptide	1	28	0.87
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	392	0.99