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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IRE1A_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRCPFLRH LFFLLLLLSP WIMSPCGGAA DDVTYPIVPS SPGRRSILQI RREPPTEPNT  60
   61 KLVVDRDGKV FLKQQPKETP YWSFSTGSPM HSLYQAPANN NTENATEITR PHIIVEYLNN 120
  121 SKAATTVDGY HNWTVQEFFR QKPLVTDDGV TLGSETTSAY LVDGRSGRLI HVYKSTGDTK 180
  181 ITNALVKPAS TEDFVNEPLL IRRTDSKLEH FSKTTGKLVW NLTVSHFRAA LLCDPVFNSG 240
  241 YDLGPKLQTG IYMPLLCGSQ IDVRGPEIVI RVLHDQPMNV KMLPSPSLNH FESENSIMPF 300
  301 GKARESRKLQ EQHKQKYTYL FGQWSPVKLL APLVLLGVVV SVFIKKFSSR GSDVSLKAGP 360
  361 SKKKKNRKSA KDTNRQSVPR GQDQFELIEG GQMLLGFNNF QSGATDGRKI GKLFLSSKEI 420
  421 AKGSNGTVVF EGIYEGRPVA VKRLVRSHHE VAFKEIQNLI ASDQHTNIIR WYGVEYDQDF 480
  481 VYLSLERCTC SLDDLIKSYL EFSMTKVLEN NDSTEGVAAY KIQLDSLEGV IKGNNFWKVG 540
  541 GHPSPLMLKL MRDIVCGIVH LHELGIVHRD LKPQNVLISK DMTLSAKLSD MGISKRMSRD 600
  601 MSSLGHLATG SGSSGWQAPE QLLQGRQTRA VDMFSLGCVI FYTITGCKHP FGDDLERDVN 660
  661 IVKNKVDLFL VEHVPEASDL ISRLLNPDPD LRPSATEVLL HPMFWNSEMR LSFLRDASDR 720
  721 VELENREADS EILKAMESTA PVAIGGKWDE KLEPVFITNI GRYRRYKYDS IRDLLRVIRN 780
  781 KLNHHRELPP EIQELVGTVP EGFDEYFAVR FPKLLIEVYR VISLHCREEE VFRKYFKCDI 840
  841 I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle