YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16930467, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTMALSS PAFAGKAVKP AASDVLGSGR VTMRKTVAKP KGPSGSPWYG SDRVKYLGPF  60
   61 SGEPPSYLTG EFPGDYGWDT AGLSADPETF ARNRELEVIH SRWAMLGALG CVFPELLARN 120
  121 GVKFGEAVWF KAGSQIFSDG GLDYLGNPSL VHAQSILAIW ATQVILMGAV EGYRVAGDGP 180
  181 LGEAEDLLYP GGSFDPLGLA TDPEAFAELK VKELKNGRLA MFSMFGFFVQ AIVTGKGPLE 240
  241 NLADHLADPV NNNAWAFATN FVPGK

Type	Start	End	Confidence
Signal Peptide	1	14	0.70
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	265	0.83