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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCS20_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHNQNQPHR PVPVHVTNAE PNPNPNNLPN FLLSVRLKYV KLGYHYLISN ALYILLLPLL  60
   61 AATIANLSSF TINDLSLLYN TLRFHFLSAT LATALLISLS TAYFTTRPRR VFLLDFSCYK 120
  121 PDPSLICTRE TFMDRSQRVG IFTEDNLAFQ QKILERSGLG QKTYFPEALL RVPPNPCMEE 180
  181 ARKEAETVMF GAIDAVLEKT GVKPKDIGIL VVNCSLFNPT PSLSAMIVNK YKLRGNILSY 240
  241 NLGGMGCSAG LISIDLAKQM LQVQPNSYAL VVSTENITLN WYLGNDRSML LSNCIFRMGG 300
  301 AAVLLSNRSS DRSRSKYQLI HTVRTHKGAD DNAFGCVYQR EDNNAEETGK IGVSLSKNLM 360
  361 AIAGEALKTN ITTLGPLVLP MSEQLLFFAT LVARKVFKVK KIKPYIPDFK LAFEHFCIHA 420
  421 GGRAVLDEIE KNLDLSEWHM EPSRMTLNRF GNTSSSSLWY ELAYSEAKGR IKRGDRTWQI 480
  481 AFGSGFKCNS AVWKALRTID PMDEKTNPWI DEIDDFPVQV PRITPITSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle