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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y2913_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFLTLTSF FFICFFIHGS SAVDTISGDF TLSGDQTIVS SDGTYEMGFF KPGSSSNFYI  60
   61 GMWYKQLSQT ILWVANRDKA VSDKNSSVFK ISNGNLILLD GNYQTPVWST GLNSTSSVSA 120
  121 LEAVLQDDGN LVLRTGGSSL SANVLWQSFD HPGDTWLPGV KIRLDKRTGK SQRLTSWKSL 180
  181 EDPSPGLFSL ELDESTAYKI LWNGSNEYWS SGPWNPQSRI FDSVPEMRLN YIYNFSFFSN 240
  241 TTDSYFTYSI YNQLNVSRFV MDVSGQIKQF TWLEGNKAWN LFWSQPRQQC QVYRYCGSFG 300
  301 ICSDKSEPFC RCPQGFRPMS QKDWDLKDYS AGCVRKTELQ CSRGDINQFF RLPNMKLADN 360
  361 SEVLTRTSLS ICASACQGDC SCKAYAYDEG SSKCLVWSKD VLNLQQLEDE NSEGNIFYLR 420
  421 LAASDVPNVG ASGKSNNKGL IFGAVLGSLG VIVLVLLVVI LILRYRRRKR MRGEKGDGTL 480
  481 SAFSYRELQN ATKNFSDKLG GGGFGSVFKG ALPDSSDIAV KRLEGISQGE KQFRTEVVTI 540
  541 GTIQHVNLVR LRGFCSEGSK KLLVYDYMPN GSLDSHLFLN QVEEKIVLGW KLRFQIALGT 600
  601 ARGLAYLHDE CRDCIIHCDI KPENILLDSQ FCPKVADFGL AKLVGRDFSR VLTTMRGTRG 660
  661 YLAPEWISGV AITAKADVYS YGMMLFELVS GRRNTEQSEN EKVRFFPSWA ATILTKDGDI 720
  721 RSLVDPRLEG DAVDIEEVTR ACKVACWCIQ DEESHRPAMS QVVQILEGVL EVNPPPFPRS 780
  781 IQALVVSDED VVFFTESSSS SSHNSSQNHK HSSSSSSSKK MTNDNSSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle