YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10998141, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVTPNYYH SYTFFFFFFV VLLALFLHVF SINTLSSTET LTISSNRTIV SPGNIFELGF  60
   61 FKTTTSSRNG DHWYLGIWYK SISERTYVWV ANRDNPLSKS IGTLKISYAN LVLLDHSGTL 120
  121 VWSTNLTRTV KSPVVAELLD NGNFVLRDSK GNYQNRFLWQ SFDYPVDTLL PEMKIGRDLK 180
  181 TGHETFLSSW RSPYDPSSGD FSFKLGTQGL PEFYLFKKEF LLYRSGPWNG VGFSGIPTMQ 240
  241 NWSYFDVVNN FIENRGEVAY SFKVTDHSMH YVRFTLTTER LLQISRWDTT SSEWNLFGVL 300
  301 PTEKCDLYQI CGRDSYCDTK TSPTCNCIKG FVPKNVTAWA LGDTFEGCVR KSRLNCHRDG 360
  361 FFLLMKRMKL PGTSTAIVDK TIGLNECKER CSKDCNCTGF ANKDIQNGGS GCVIWTGGAH 420
  421 GYEELRRRRS RSICQNRPL

Type	Start	End	Confidence
Cytoplasmic	1	10	0.84
Transmembrane Helix	11	32	0.89
Non-Cytoplasmic	33	439	0.98