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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6227009, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSMIASRQQ SQRSCPICAT PFPSSSSSHK WTHQVFPSFR GEDVRRGFLS HIHKEFQRKG  60
   61 ITPFIDNEIK RGESIGLEII HAIRESKIAI VLLSRNYASS SWCLDELVEI MKCKEEFSQI 120
  121 VIPIFYRVDP SDVKKLTGNF GNVFKNNCVG KTNEVIRKWR QALAKMGTTT GYDSRNWDNE 180
  181 ATMIENIATD ISNMLNYSTP SRDFDGLIGM RAHMKVMEPM LCLHSDEVRM IGIWGPSGIG 240
  241 KTTIARILFS QFSDSFELSV FMENVKELMY TRPVCSDEYS AKLHLQKQFM SQIINHKDIE 300
  301 IPHLGVVEDR LKDKKVFIVL DNIDQSIQLD AIAKESRWFG HGSRIIITTQ DRKLLKAHDG 360
  361 INHIYNVNFP SAYEACQIFC MYAFGQKFPK DGFEELAWEV AKLLGGLPLG LRVMGSHFRG 420
  421 MSKHEWINAL PRLRTRLDAN IQSILKFSYN ALCEEDKDLF LYIACLFNNK RIEKVEEHLA 480
  481 EKSLNVKQGL HVLTEKSLIS IEGGRIKMHN LLEQLGKEIV RHGLGHQPIR EPGKRQFLVD 540
  541 TRDICELLTN DTGSKSVIGI HFYSSELSSE LNISERAFEG MPNLKFLRFY YRYGDESDKL 600
  601 YLPQGLNYLS QKLKILEWDH FPLTCMPSNF CTEYLVELNM RFSKLHKLWE GNRPLANLNW 660
  661 MYLNHSKILK ELPDLSTATN LQELFLVKCS SLVELPSSIG KATNLQKLYL NMCTSLVELP 720
  721 SSIGNLHKLQ KLTLNGCSKL EVLPANINLE SLDELDLTDC LVLKRFPEIS TNIKVLKLLR 780
  781 TTIKEVPSSI KSWPRLRDLE LSYNQNLKGF MHALDIITTM YFNDIEMQEI PLWVKKISRL 840
  841 QTLILNGCKK LVSLPQLPDS LSYLKVVNCE SLERLDCSFH NPKMSLGFIN CLKLNKEAKE 900
  901 LIIQITTKCT VLPGREVPVY FTHRTKNGSS LRVNLNRRPL STASRFKACI LLVNKYCKEN 960
  961 EVKEVFGRKM MKASYCIIDL GLDVQCRPTH HFLPPSLTEH LYIFDFEADV TSNELFCDFQ1020
 1021 VDSNEMVIKE CGIIQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle