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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRKS7_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSRKLLVI FFTWITALSM SKPIFVSSDN MNFTFKSFTI RNLTFLGDSH LRNGVVGLTR  60
   61 ELGVPDTSSG TVIYNNPIRF YDPDSNTTAS FSTHFSFTVQ NLNPDPTSAG DGLAFFLSHD 120
  121 NDTLGSPGGY LGLVNSSQPM KNRFVAIEFD TKLDPHFNDP NGNHIGLDVD SLNSISTSDP 180
  181 LLSSQIDLKS GKSITSWIDY KNDLRLLNVF LSYTDPVTTT KKPEKPLLSV NIDLSPFLNG 240
  241 EMYVGFSGST EGSTEIHLIE NWSFKTSGFL PVRSKSNHLH NVSDSSVVND DPVVIPSKKR 300
  301 RHRHNLAIGL GISCPVLICL ALFVFGYFTL KKWKSVKAEK ELKTELITGL REFSYKELYT 360
  361 ATKGFHSSRV IGRGAFGNVY RAMFVSSGTI SAVKRSRHNS TEGKTEFLAE LSIIACLRHK 420
  421 NLVQLQGWCN EKGELLLVYE FMPNGSLDKI LYQESQTGAV ALDWSHRLNI AIGLASALSY 480
  481 LHHECEQQVV HRDIKTSNIM LDINFNARLG DFGLARLTEH DKSPVSTLTA GTMGYLAPEY 540
  541 LQYGTATEKT DAFSYGVVIL EVACGRRPID KEPESQKTVN LVDWVWRLHS EGRVLEAVDE 600
  601 RLKGEFDEEM MKKLLLVGLK CAHPDSNERP SMRRVLQILN NEIEPSPVPK MKPTLSFSCG 660
  661 LSLDDIVSED EEGDSIVYVV S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle