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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLRX2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERPFGCFFI LLLISYTVVA TFDDEPSFPE NADLTKDLEQ KCFSINKVDP NLKFENDRLK  60
   61 RAYIALQAWK KAIYSDPFKT TANWVGSDVC SYNGVYCAPA LDDDSLTVVA GVDLNHADIA 120
  121 GHLPPELGLM TDLALFHINS NRFCGIIPKS LSKLALMYEF DVSNNRFVGQ FPEVSLSWPS 180
  181 LKFLDLRYNE FEGSLPSEIF DKDLDAIFLN NNRFESVIPG TIGKSKASVV TFANNKFSGC 240
  241 IPKSIGNMKN LNEIVFTGNN LTGCFPNEIG LLNNVTVFDA SKNGFVGSLP STLSGLASVE 300
  301 QLDLSHNKLT GFVVDKFCKL PNLDSFKFSY NFFNGEAESC VPGRNNGKQF DDTNNCLQNR 360
  361 PSQKPAKQCL PVVSRPVDCS KDKCSGGSNG GSSPSPNPPR TSEPKPSKPE PVMPKPSDSS 420
  421 KPETPKTPEQ PSPKPQPPKH ESPKPEEPEN KHELPKQKES PKPQPSKPED SPKPEQPKPE 480
  481 ESPKPEQPQI PEPTKPVSPP NEAQGPTPDD PYDASPVKNR RSPPPPKVED TRVPPPQPPM 540
  541 PSPSPPSPIY SPPPPVHSPP PPVYSSPPPP HVYSPPPPVA SPPPPSPPPP VHSPPPPPVF 600
  601 SPPPPVFSPP PPSPVYSPPP PSHSPPPPVY SPPPPTFSPP PTHNTNQPPM GAPTPTQAPT 660
  661 PSSETTQVPT PSSESDQSQI LSPVQAPTPV QSSTPSSEPT QVPTPSSSES YQAPNLSPVQ 720
  721 APTPVQAPTT SSETSQVPTP SSESNQSPSQ APTPILEPVH APTPNSKPVQ SPTPSSEPVS 780
  781 SPEQSEEVEA PEPTPVNPSS VPSSSPSTDT SIPPPENNDD DDDGDFVLPP HIGFQYASPP 840
  841 PPMFQGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle