YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSATAPNS LSFFSSSLFL SSSHQIPKTY ISVSKLGSGR VSKPLSVSSQ LATLPILSFE  60
   61 GEKVGETYLD LKAAPEDTAR AVVHRAIVTD LNNKRRGTAS TLTRGEVRGG GIKPYSQKKT 120
  121 GHARRGSQRT PLRPGGGVVF GPRPKDWSIK INRKEKKLAI STALSSAASA EGGAIVVEEF 180
  181 GEKFEKPKTK DFLAAMQRWG LDPKEKAMFL MIDVDENVAK SSRNIGTLRM LTPRTLNLFD 240
  241 ILNADKLVLT PAAVEFLNAR YGVDAVEEED DDEDETEGSE EA

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	282	0.99