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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYM1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIPEKPIFL IFVSLILASS LTFTATAKST IEPCSSNDTC NALLGYTLYT DLKVSEVASL  60
   61 FQVDPISILL ANAIDISYPD VENHILPSKL FLKIPITCSC VDGIRKSVST HYKTRPSDNL 120
  121 GSIADSVYGG LVSAEQIQEA NSVNDPSLLD VGTSLVIPLP CACFNGTDNS LPAVYLSYVV 180
  181 KEIDTLVGIA RRYSTTITDL MNVNAMGAPD VSSGDILAVP LSACASKFPR YASDFGLIVP 240
  241 NGSYALAAGH CVQCSCALGS RNLYCEPASL AVSCSSMQCR NSNLMLGNIT VQQTSAGCNV 300
  301 TTCDYNGIAN GTILTMLTRS LQPRCPGPQQ FAPLLAPPDT VPRDVMYAPA PSPDFDGPGS 360
  361 IASSPRSSML PGGGILPGNP ANGPAGSIST ASASSVSYFF ITFLISIASF SLALSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle