YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FRI4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKTVSSSS SSALSLVNFH GVKKDVSPLL PSISSNLRVS SGKSGNLTFS FRASKSSTTD  60
   61 ALSGVVFEPF KEVKKELDLV PTSSHLSLAR QKYSDECEAA INEQINVEYN VSYVYHAMYA 120
  121 YFDRDNIALK GLAKFFKESS LEEREHAEKL MEYQNKRGGR VKLQSIVMPL SEFEHVDKGD 180
  181 ALYGMELALS LEKLVNEKLL NLHSVASKNN DVHLADFIES EFLTEQVEAI KLISEYVAQL 240
  241 RRVGKGHGTW HFNQMLLEG

Type	Start	End	Confidence
Signal Peptide	1	21	0.76
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	259	0.99