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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNG13_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGRNNRVR FRDWISEGTE YGYGRNKARP SLNTVLKNVR RGLKKPLSFG SHNKKRDSNS  60
   61 STTTQKNIIN PQGSFLQNWN KIFLFASVIA LAIDPLFFYI PIVDGERHCL NLHRNLEIAA 120
  121 SVLRTFIDAF YIIHIVFQFR TAYISPSSRV FGRGELVDDP KAIAIKYLSS YFIIDLLSIL 180
  181 PLPQLVVLAV IPNVNKPVSL ITKDYLITVI FTQYIPRILR IYPLYTEVTR TSGIVTETAW 240
  241 AGAAWNLSLY MLASHVFGAL WYLISVERED RCWREACEKI PEVCNFRFLY CDGNSSVRND 300
  301 FLTTSCPFIN PDDITNSTVF NFGIFTDALK SGIVESDDFW KKFFYCFWWG LRNLSALGQN 360
  361 LNTSKFVGEI IFAVSICISG LVLFALLIGN MQKYLESTTV REEEMRVRKR DAEQWMSHRM 420
  421 LPDDLRKRIR RYEQYKWQET RGVEEENLLR NLPKDLRRDI KRHFCLDLLK KVPLFEIMDE 480
  481 QLLDAVCDKL KPVLYTENSY AIREGDPVEE MLFVMRGKLM SATTNGGRTG FFNAVYLKPS 540
  541 DFCGEDLLTW ALDPQSSSHF PISTRTVQAL TEVEAFALAA DDLKLVASQF RRLHSKQLQH 600
  601 TFRFYSVQWR TWGASFIQAA WRRHCRRKLA RSLTEEEDRF RNAITKRERN AASSSSLVAT 660
  661 LYASRFASNA LRNLRTNNLP LLPPKPSEPD FSLRNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle