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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE36012
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKDTLASP KFQLMASLIF FIAGVTALVI TIIAISSDKK SEQPPPILPS HTEALKAPAP  60
   61 VTTSRPPNLT TSTLPNSSSR PPSIPICDTP ECVTLAHQLL NYRDISVDPC ENFEKSACGK 120
  121 FRENSLNSNV HRSKIFIPRM IKKFLRKNET STSKSENTLR LLYRKCEQYA TVVSVRVGDN 180
  181 DDHEEAYQLI FNKIQSIGSC PLLNGTWDAS KFNLNGIKAL IIFFYNIITD MLLKIAEIGF 240
  241 TNFGFFEISQ MRKPLLTTDS IEKMLFSLSD ANYHDLDDDL VSDYAKEVEK LDVELKKTIF 300
  301 KDNPVDENQP KTLDTLKTFV PSIDFERLIK SFINPKNSKK EQMLKSSPTE RFHLNILFFS 360
  361 VKREINFQLE TIIKKTPPNV LANYLVLKFL TESVEEFIKK NSTALCEEIV MEKLDYAAFR 420
  421 VYYQNYFDKE NLQIVSDMID DTKKNFIEMI QESTWLHEST KKSAIRKVEA MKKIVGYPQE 480
  481 FTPPGTLDKL FENIDTSPAD SFITLLQKIK RFNLELRMAY VSGESELNLK RALLQVNAMY 540
  541 VPHENLMQMF APYMSTPHFD STYPDYAKLA TIGMVIGHEM GHGFDTRGGE YDENGMRNNW 600
  601 WTDENKKLYK KKVGCLVEQY NAYDDPELGK NLTGSKVKHE LIADGFGAEV AWKAYKKLDL 660
  661 SKQPRLIGFQ DFNVDKLFFY IRALKFFGNE IPEKQKPRRL EKATHPTHSF RINGVVSNWK 720
  721 PFAETFNCPV GSPMNPEKKC ELF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle