YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nas-12
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYIPQFSIY FCLGYLLLFC KISNAVKQSW EINQELITEA NKEHTVFGDM LLTPAQLIRY  60
   61 ENSKDSDLSI RGVSIKGSSM NRWSNNIVPY VISPQYSPAQ KQILVSSLRY FERVSCFKFV 120
  121 ERTTQNDYLF IVPLDGCYSY VGKIGGRQTL SLAADCIADY IIWHEMMHAI GFEHEHQRPD 180
  181 RDSFIRVDYA NVIPGQMINF DKLKTSHVEY PDIYDFKSIM HYDGYAFGRV DTARRVRLAT 240
  241 MTPLKPGVTL EDNMKFTATD IEKLNRLGQC GARGGQYSNQ GVVASTCQDV ATAVSCEGNR 300
  301 RRGMCKNPFY KQMMIKSCQK TCRLCSYTRM IDEDDDLTPN TTVKSVKCED KHPRCDIYSH 360
  361 NGFCTLPFYD DVRYQLCAKT CNLC

Type	Start	End	Confidence
Signal Peptide	1	25	0.65
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	384	0.98