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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pbo-5
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLSILQHL LTFLILSKIN ATSTTESYFD SSEEAPNVLL NHLNNESEGE ELTQINDTQP  60
   61 AFVPGSSKRL TEYLLSRHNL NAPPDGLLYV EYELELVHIL GIDELKQTMT VLIYVDEHWV 120
  121 DPSLTWDPAL FGGITKTWIP LDKIWVPDII VFNMLAHEDL LSAVRAPARI HYNGTIVASH 180
  181 PAVHTVSCEI NIRHFPLDDQ RCAIEIASWA YGQEKIRLHA HTDHSLEHYK RNEEWHLLNL 240
  241 NVSEEKYEHE GVEVSEVKFE ISLKRRPLFY MVTLTFPSYI MCAISVVGLF ARFSTTGERE 300
  301 ERFTLGVTAI LTMAVLSLVV SEKVPHSSTH VPLLVAYFLF NMVIVSIAAM TTGIVMKVHR 360
  361 LGRYGDEPSD FWMRCFLLKP VFRTSNRRKY RMNPEEPTQV ILVSEAKNGE VLTKKSTELN 420
  421 GTVVKEIMLS SRLEALEEYI RKMVNRCETI KWELDEIDAA ENIELVRRRS TNGYVRISER 480
  481 LDILFMFLFL STVTIPVAVL FYLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle