YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE31083
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRRAVSVH RFLSRAARQS VTAASSAQPS LQAKTSLLEP LVQNVRITSS ANFHMSAVRM  60
   61 SDVITVEGPA FAESISEGDI RWLKQKGDHV NEDELVAEIE TDKTSVEVPA PQAGTIVEFL 120
  121 VEDGAKVTAK QKLYKLQPGA GGGSSSAPAK EEPKSAPAKE ESKPAPAKED SKPAVTAAAP 180
  181 PKPVSGDIPK SAPPVARPPS TPSSSTPVGA VPVTRVVVPK GVDPSHAITG ARDEVRVKAN 240
  241 RMRMRIAQRL KDAQNTYAML TTFNEIDMSS LIEMRKTYQK DFVAKHGVKL GMMSPFVRAA 300
  301 AYALQESPVV NAVLDENEIV YRHFVDISVA VATPKGLVVP VLRNVESMNY AQIELELANL 360
  361 GVKARDGKLA VEDMEGGTFT ISNGGVFGSM FGTPIINPPQ SAILGMHGVF DRVVPVNGKP 420
  421 EIRPIMQIAL TYDHRLIDGR EAVTFLKKIK TAVEDPRIMF MNL

Type	Start	End	Confidence
Signal Peptide	1	33	0.91
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	463	0.99