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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30792
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLVAFNRQ WNIGSDDFVF PEITEALVRL SWVAFGVSVF VFHFPLACST HNLTLQLLGL  60
   61 LVINVITILL AILTAVISAR GTIMNSQPRK LIPRLLYIRL PIFIAEIALT ILATIHAFKS 120
  121 TNGGEGCDFA TIARVTIILE WFLIFTAFAG LVIVFHLTEN ELEDSASIAQ KSWSRRMRIF 180
  181 KIGQDHSMRV ALDDLAILIS SFFVDSDLVP SDVVAGLLLA YHSPNNQYPP VKDKEHESVP 240
  241 KWMNLKDAEY FLHHATCVYG WPTYILYNCG LKSIYRLFRK LQCCGRMRCA QSPCVVQQQR 300
  301 RERIELTELS NGKLVKKGKS MVVEDNCCYC NTAAVVLANE ARNIDLQFMS FRNRVYEVPF 360
  361 AVIADHDKKS IVITIRGSCS LIDLVTDLSL EDELMTVDVD QDATLREDEE IDKRGDVRVH 420
  421 RGMLRSARYV FDTLNKNKIL NDLFISNPSY QLVVCGHSLG AGVGSLLTML LKQEYPSVIC 480
  481 YAFAPPGCVI SEFGQDEMEK YVMSVVSGDD IVSRMSFQSL HRLRERVFQE LLACQRAKYE 540
  541 ILIRGVYQLF FKYPWGDELS GVPRISASPD SPTTPDIESA LLTRRNSYGA SDPTSEASPT 600
  601 PPQRNPNHNK RLQLYVPGRV IYLSADQDTG ATVETWIDPK CLSDVKLSVS VLSDHLPAAV 660
  661 QKFLNSAAIT FEQREEIVSS QPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle