YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nas-8
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNDLLNNK ITIFLSSLSL FVIIIPIYAA EKDLLPPSTS SETFLTDEDF LRPLNDDETF  60
   61 LTEKDFKNGE KLGEDHVPAG SILWKQVYKK GDIRGKAAWK LDPKNSESLR RNGVITGTRK 120
  121 WPNGRIPYVI SNQYNDRERA VLARSFQAYH DKTCVRFVPR TAVDNDYLYI GKIDGCYSDV 180
  181 GRAGGRQELS LDNGCLQYDT AIHELMHSVG FYHEHERWDR DEHITILWHN IDREAYDQFG 240
  241 KVDLAESSYY GQLYDYYSIM HYDSLAFSKN GFETMVAKQS EMTAVIGAAI DFSPIDILKM 300
  301 NLMYQCSDVK LPPTVVGTTD KTIVPVPAPS VTVVEDDCRD RTNLCWRWID RCKSFFFEQI 360
  361 MKEFCSLSCG YCTPKALQTA KASPPNYSNT LLTKSSTSYL QHG

Type	Start	End	Confidence
Signal Peptide	1	29	0.56
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	403	0.99