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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cle-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPRHHLGG LLYFCALYLL RASQAQPPTF FALNALPGDS ETEVDLLAPV KASLNADARV  60
   61 FRAKGIESLP AIGLQRGVEI AVPYRLYLPR NFFKQFSLLA TIKPMDKRGG YLFAAVNAYD 120
  121 SAVDIGLLIE PAGTKQTNIS LIVRSVAIVS FLVEDFSQQW TQFALEVVDQ TVTFYFKCRR 180
  181 FASRQVTSLP DFSFDEAEKL YIASAGPIID NGFEGAIQEL KLIDDATQGS RQCDEQWGAE 240
  241 GSGTPEEFKK TQESSELQKI SDFPPTPAPP PPYPTPQLAP HDLRSYEQQA ATTPFQGAPP 300
  301 SNQCTQVCRG EPGPQGPSGN DGIPGSHGAP GHQGERGADG APGLHGSRGD QGLPGPPGMP 360
  361 GLAGPPGPPG SGTGHGSGAD GPQGPPGLPG APGRDGTSGV EGQRGPQGPP GPKGDDGVSM 420
  421 ESLTDDDIER IARRVASIQK ESNEPMRGDL PEYNSKVHSF TTKGEKGERG APGAPGAPAP 480
  481 PAYGTLTTGT AVNVHATTVE LFASARSTSV GQLAFATSSQ QLFIRVTNGW KEIQLTHFHP 540
  541 FVETRHSTQN SRQNDASHAG RSRTGSAAAP WYPKANLDEP QRDAGVHNKD RVIHMIALSQ 600
  601 PFSGNLHGLR GADLQCYREA RAAGYTTTFR AMLSSNVQDL VRIVHSVDFD TTVVNVAGHH 660
  661 LFPSWRSFVN GAQMNPHAKL FSFDRHDVLN DSRWPDKRVW HGSKDGGIRA EQYCDGWRRA 720
  721 DSSLTSLAGH ISSNTSIFQS SGSEKCENKL VVLCVENMSK YHGDRILRLH RITSDFKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle