YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	dhs-14
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFSGKVAL VTGSSNGIGR ATAVLLAQEG AKVTITGRNA DRLEETRQEI LKSGVPEDHV  60
   61 LSIATDLATE KGQDELVNST IQKFGRLDIL VNNAGAAFND DQGRVGVDQD VSVYDRIMQI 120
  121 NMRSVVTLTQ KAKEHLVKAK GEVVNVSSIG AGPQAQPTFM YYAMSKAALD QYTRSAAIDL 180
  181 IQYGVRVNSV SPGAVVTGFG EAMGMPADMH EKYGHFMESR KECIPCGKMG QPIDIANIIA 240
  241 FLADRKLSSY IIGQSIVADG GSTLVMGMQA HNFMDLLKQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.66
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	279	0.95