YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cyp-33C12
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLFLSVL FLALFYEFHW KRRNYPAGPL PLPVIGNMWS MMRNNSGVEC FRQWTKDFGD  60
   61 VYTFWFGTKP YIVVSSYKRL KEAFILDGDT FADKIRQPFQ DQFRGGNYGV VDTNGHVWST 120
  121 HRRFALSSFR DFGLGKNLLQ EKMLIEVQDM FAKFDANLGK EQNLPVVLYN AAANVINQLI 180
  181 FGYRFDKERE GELKKLKALM EFQETAFTTF KVYVQFFAPA IGKHLPGKSV EDLLAEFTVD 240
  241 FYKFFNHQIE EHRSKIDFDS EESLDYAEAY LKEQRKQEAQ GEFELFSTKQ LSNTCFDLWF 300
  301 AGLSTTHITL TWIVGHVLNY PDVQRKLHKE LDEVIGSDRL ITNDDKNNLP YLNAVINESQ 360
  361 RCANIVPINQ IHSTSRDTVI NGITVKKGTG VIPQISAIML DDKVFPDPYA FNPERFLDAN 420
  421 GKLRKI

Type	Start	End	Confidence
Signal Peptide	1	16	0.90
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	426	0.94