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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: acs-12
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIKSKLPNL DIPDKTFHDF LFHEWEKFRE DVALIDNDTF AQFTFQDVMQ KADFIAKSLV  60
   61 YLKVEKSEVV LLVMDWSPAA IYIALGASMA GAAIQVVSPK LQAWEMQFPV KESESRFVFS 120
  121 DPLGLHEIDK LMKTLNREYR IICTGSRDFA NGYPIIEDLA FAAKQNLPLP KIEPDTDIVY 180
  181 LPYSSGIHGK RKGIVTTHKV MVAKTMVMWN TSKHHEFRRG DTTLTMIPLH KQCGLDAILC 240
  241 ALLNGLTVVT EKNFCVHTFM TCIQRYKIRA VHLTPYLMNL MMFEAENHTY NIESLEWVVT 300
  301 GADAVTEELY EEFTEIFPSV KTVTQTYGMT EVGLICRTYN KNYSPSCGQL TANLEMKVLD 360
  361 ILTGKELGPR EKGQICVKGI AAESPYLNNP KATEEHFLDG WRRTGDIGFF DEEGNVHLVD 420
  421 KLKEMIKVFG YQVIPKEIET LLLTHQAVEE AAVVAINNEL SGERPVAFVV LKKGFVATED 480
  481 DLKDYVNKRV IRYKHLVRVN ITQFLPKSAC GTLLRRLLAE AAVMSVASIA EVEKEFVPEL 540
  541 PADMKSILTH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle