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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tax-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQVPKRAKT NLAREIRKRE FSYVDRQKAS KPTQLSEKEW KSPRSEDSFD LLDPANASKE  60
   61 PSASTRPLPY PPTRPPEVVI QIDEVESPIL GLIDETDDHE LDGRLDPASS FDANSLSATR 120
  121 ASSIIEDDVR SQISFIMRER LHSIAKEVHR RTSAVREDLI RETPEDTVSM ASNVPKQNEH 180
  181 RPSLMSLIGL QNRSESPTVD TVKNCFGFSL KGTFHPYGRF YMTWLSLVTL CFLFNAFCIP 240
  241 LRSSYPYQTA DNWMYWFIVD YSCDLVYVID MLLIKPRLRF TRGGIQVKIY KDTQRHYLMT 300
  301 RTFKLDILSI LPTDLMYFFF GKMPIWRINR VLKINSFWLL FDMLDNSFAN PYAIRIARTL 360
  361 SYMIYIIHCN SCVYYKLSAL QAFGQIAYLE NGKWYLNKWV YNNQGNAYIR CFYFTAAVAT 420
  421 STGNNPAPTN VIEYIYMTCS WMMGVFVFAL LLGQIRDIVS NANRNREEFQ RKMDLALGEC 480
  481 KKLGLKMETT NRVRDWFIYT WQQQKTLDEK KLIEKLPLKL QTDLALSVHY TTLSKVQLFQ 540
  541 DCDRALLRDL VLKLRPVIFL PGDMICLKGD VGKEMYIINQ GILQVVGGDH NEKIFAELAQ 600
  601 GAVFGEISLL AIGGNNRRTA SIRAKGYCTL FVLAKEDLND VIRYYPQAQT ILRRKAAAML 660
  661 KNDKKSDEKT EKIKAQAELE DRCKINPRQV PKLITLIANM TEMNENKGVQ ELKKVIEEET 720
  721 EKSRRQSIYY PWSTLQRDDD DEEEWNDEED LSDVGEDFDL DPTNHSDDED PMEDVDLAPE 780
  781 VHDDDWDQPG TSGTQKLHAD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle