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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE13307
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKNKRKEK EKERKKAEKF SADEKTANIK DRIINCVYPV ILIILFWLLL FIGARQDEKP  60
   61 SLCESPQCIT LAFELSAYQD TSVSKCHNFY KATCGKYKHH QALDKHRDAK KKEVVKRIVR 120
  121 EFLRRNESSI TSKFEPAIRL MFGKCNKFSQ NKTYLDIFKD IEKIGPWPVL KSDWVDVMFN 180
  181 LNDYLLSLVE LGFTDFGLFK LEFRQLAFGQ FPVIAPSEQK QGNQLEKIIL EILEANGVQA 240
  241 DRQKLSKYLR EYSEFKSQLR HMSLEGTSVK YIRYNASTLS VNISALVQKM APMSTSSGLV 300
  301 RRIQSGILIT NSSSFFGKNL DAIIQQTHKR TLANYLIFHF IDAVTFDLTS GAKHSEHTLI 360
  361 DLLPRGSLQV LSQDFVDEED QGVMVEMAKD LKKHVVEMIS EGSSLDKGHL VFEEKERRKL 420
  421 IRKVQDILVV TKYPLEILNQ NFEKLNLTYS DSLHKIIQKL RRFRSEQLIE YLGGDLDPTD 480
  481 KGMWGSAHYE QATNDLIIIA PIIDGPYFDT SYPNYVNIFF MGFIISRELG RSLDSVRIRK 540
  541 DEKGHTENWL KSESLKRFDN NVKCWRKKIT GTRFLNEMLA DHVGHEASFM ALKKWEKEMN 600
  601 GTIVEKIRGY ESMTMEQIFF HLQALYFCRP PGGSTGELTA KDARQHYSTR VNEAFKNMPQ 660
  661 FAKAFGCSSN QNMNSKTKRF EEHG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle