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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sdn-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKLNFCLS TYSVLILLSL STQAFAANQA KTKVVPSSTI STKSLKNGIS EQVEGSANIP  60
   61 GRLADIEVNG SGYPTDDEDG DDVHGSGKPP SSATTKSDKV TSPSHAVVTA KPTTVPTTTA 120
  121 SFKPPVQPKP KPAANDKEIK VEEDEDDDED EDEDDEDDEE DFADENIHND EDFFTTTTTT 180
  181 TYRPIVVATT STPRSAATNP PRQQPPMVTS TISSGPFSPF HETLANGFYA AIAGGVLVAV 240
  241 ITAILLVLFV VFRIRKKDEG SYALDEPKQA RPYASYGYTK ASTKEFYA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle