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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: emb-8
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAWIVSGLD TSDLVVLTLL AGGAIIFLFM KVFNQQPSSS RYSPTVASVT TSAAASKSNQ  60
   61 SFIDRMKNEN RQVLIMYGSQ TGTAEEMSGR LAKDLTRYTK KAVVVDPEDI ECEDLNRLSE 120
  121 VEDALLVLCI ATYGEGDPTD NAVTLVEYLN AGDCDLSGVR FAVFGLGNKT YEHFNEIGIQ 180
  181 MDKQLEKLGA KRIFHLGLGD DDANLEEDFM IWREAFLPKV AEEFGWELNT EAETMRQYQL 240
  241 EPVEEGKALF KGEFGRLGAY ERPRPPFDVK NPYLATVAIN DELHTEHSDR SCRHIEFSVE 300
  301 GSRIRYEAGD HLAVFPTNDP VLVDRLINML QFDPDHAFRL VNVDEDASKR HPFPCPTTFR 360
  361 TALSHYVDIC APVKSHVLKA ISEYCTDDTE KEFLNKLSTA NEEGLKEYAR YIVKERRSIV 420
  421 DVLTDQKTCK PPIEYLLELL PRLQARYYSI ASSPRLNEEK IAICAVVTKY SIGDRDINGV 480
  481 CTRYLTTKDA GSKSPVFVRK STMRLPHRTT TQVIMIGPGT GFAPFRGFLQ DRQFHKNAGK 540
  541 EIGAMHLYYG CRHPDHDYIY KDELAKFQED EVLTHLVCAF SRAQEHKIYV QDRLWETRDR 600
  601 IWDAINVGAH VYICGDARNM ARDVQATLQK IFREIGGKSE TEAVAYFKDM EKTKRYQADV 660
  661 WS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle